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Jeff,
Its probably best to test the DV first.
A simple test is to:-
1) remove the DV.
2) Push the diaphragm within the DV up using a screwdriver.
3) When the diaphragm is up, cover the vacuum nipple on top of the DV with your finger. Does the diaphragm stay up, or does it come back down? If it holds in position, the DV is probably ok.
There is more accurate testing that can be performed, but you need a vacuum pump for this.
With regards to the N249. I think you are actually lucky that a fault code has been reported. A lot people, like myself, have various niggling performance problems with no fault codes reported at all.
Do you have VAG-COM? Or does a mate? What you can do with this is briefly test the actuation of the N249 by peforming what VAG-COM calls output tests, and what Audi call "Final Control Diagnosis". This sequence of tests basically actuates all the solenoid type valves on the car, e.g. activated charcoal filter, N75, N249, injectors and others. So what you could do is skip to the N249 test, and listen if the valve is clicking or not.
The official test is to locate the N249, disconnect all vacuum pipes from it, but leave the electrical connector connected. Attach a test piece of hose, start the final control diagnosis on the N249, and blow down the hose. You should feel air coming out, then not coming out, of the unconnected hose nipples, as the valve opens and closes.
After that its, testing voltage supply to the N249 and then wiring loom checks.
If I were you, I'd get someone with VAG-COM to clear the fault code. Go for a drive. See if the fault returns. If it does, then I'd be inclined to believe the system. I'd then just buy a new N249.
Be careful though, some parts places confuse the N249 with the actual DV, they think its one in the same, it isn't. Some parts places confuse the N249 with the N75 too.
Hope that helps.
AL
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Al, I've got the free download version of Vag-com not sure if this is suitable to test the N249 valve, do you know if it is and if so how I perform the test using VAG-COM, any help would be great, Jeff.